Description

N-acetylgalactosaminidase, alpha- [Source:HGNC Symbol;Acc:HGNC:7631]

Synonyms

D22S674

Location
INSDC coordinates

chromosome:GRCh38:CM000684.2:42058354:42070842:1

About this gene

This gene has 3 transcripts (splice variants), 71 orthologues, 1 paralogue, is a member of 1 Ensembl protein family and is associated with 7 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
NAGA-002ENST000003963983694411aaENSP00000379680
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS14030A0A024R1Q5 P17050 NM_000262
NP_000253
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

NAGA-001ENST000004029371869411aaENSP00000384603
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS14030A0A024R1Q5 P17050 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

NAGA-003ENST000004033631856411aaENSP00000385283
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS14030A0A024R1Q5 P17050 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Gene-based displays