Description

interferon, alpha 1 [Source:HGNC Symbol;Acc:HGNC:5417]

Synonyms

IFL, IFN, IFN-ALPHA, IFN-alphaD, IFNA13, IFNA@

Location
INSDC coordinates

chromosome:GRCh38:CM000671.2:21409169:21441316:1

About this gene

This gene has 2 transcripts (splice variants), 180 orthologues, 16 paralogues, is a member of 1 Ensembl protein family and is associated with 19 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
IFNA1-001ENST00000276927863189aaENSP00000276927
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS6508L0N195 P01562 NM_024013
NP_076918
TSL:NA

Transcript Support Level Not Analysed. Pseudogenes, single exon transcripts, HLA, T-cell receptor and Ig transcripts are not analysed and therefore not given any of the TSL categories.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P2

PRINCIPAL2 - APPRIS candidate principal isoform (CCDS).

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

IFNA1-201ENST00000613815640189aaENSP00000485003
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A087X2I3 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT1

ALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Gene-based displays