Description

protocadherin beta 11 [Source:HGNC Symbol;Acc:HGNC:8682]

Synonyms

ME2, PCDH-BETA11

INSDC coordinates

chromosome:GRCh38:CM000667.2:141199582:141203779:1

About this gene

This gene has 2 transcripts (splice variants), 63 orthologues, 28 paralogues, is a member of 1 Ensembl protein family and is associated with 261 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
PCDHB11-001ENST000003547574198797aaENSP00000346802
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS4253Q9Y5F2 NM_018931
NP_061754
TSL:NA

Transcript Support Level Not Analysed. Pseudogenes, single exon transcripts, HLA, T-cell receptor and Ig transcripts are not analysed and therefore not given any of the TSL categories.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

PCDHB11-002ENST000006248871973432aaENSP00000485553
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q9Y5F2 -TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

Gene-based displays