Description

PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:HGNC:16463]

Synonyms

FBP-11, FBP11, FLAF1, FLJ20585, FNBP3, HIP10, HYPA, NY-REN-6, Prp40

INSDC coordinates

chromosome:GRCh38:CM000664.2:152651593:152717997:1

Transcripts

This gene has 12 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
PRPF40A-001ENST000004100808048 bp930 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS46430O75400 Q4ZG51 NM_017892
NP_060362
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PRPF40A-004ENST000005458561358 bp448 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5H578 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
PRPF40A-016ENST000004934681043 bp346 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0YG38 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
PRPF40A-008ENST00000448428490 bp163 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H7C2N3 -CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
PRPF40A-015ENST000003543631622 bp109 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
PRPF40A-003ENST00000486100569 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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PRPF40A-006ENST00000489741776 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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PRPF40A-009ENST00000467114546 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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PRPF40A-002ENST00000450303496 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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PRPF40A-013ENST00000471167333 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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PRPF40A-014ENST00000471701293 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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PRPF40A-012ENST00000472760243 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Gene-based displays