Description

POM121 transmembrane nucleoporin [Source:HGNC Symbol;Acc:HGNC:19702]

Synonyms

DKFZP586G1822, DKFZP586P2220, KIAA0618, POM121A

Location
INSDC coordinates

chromosome:GRCh38:CM000669.2:72879365:72951440:1

About this gene

This gene has 5 transcripts (splice variants), 65 orthologues, 5 paralogues, is a member of 1 Ensembl protein family and is associated with 135 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
POM121-003ENST000003952707011999aaENSP00000378687
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS59059Q96HA1 NM_001257190
NP_001244119
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website
POM121-202ENST000006279345480984aaENSP00000486504
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS5542-NM_172020
NP_742017
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website
POM121-002ENST000003583575320984aaENSP00000351124
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS5542Q96HA1 -TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI3APPRIS candidate principal isoform (earliest CCDS)
Glossary entry for APPRIS
APPRIS website
POM121-201ENST000004468133456999aaENSP00000393020
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS59059Q96HA1 -TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website
POM121-001ENST0000043442337501249aaENSP00000405562
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q96HA1 -TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website

Gene-based displays