Description

sarcoglycan, zeta [Source:HGNC Symbol;Acc:HGNC:14075]

Synonyms

ZSG1

Location
INSDC coordinates

chromosome:GRCh38:CM000670.2:14089864:15238339:1

About this gene

This gene has 3 transcripts (splice variants), 71 orthologues, 2 paralogues, is a member of 1 Ensembl protein family and is associated with 199 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
SGCZ-001ENST000003820802234312aaENSP00000371512
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS5992Q96LD1 NM_139167
NP_631906
TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

SGCZ-201ENST000006136921288181aaENSP00000481839
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A087WYI4 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SGCZ-002ENST00000421524867265aaENSP00000405224
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q08AT0 -TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

Gene-based displays