Description

mucin 6, oligomeric mucus/gel-forming [Source:HGNC Symbol;Acc:HGNC:7517]

Location

Chromosome 11: 1,012,821-1,036,706 reverse strand.

View alleles of this gene on alternate assemblies

INSDC coordinates

chromosome:GRCh38:CM000673.2:1012821:1036706:1

About this gene

This gene has 4 transcripts (splice variants), 2 gene alleles, 51 orthologues, 10 paralogues, is a member of 2 Ensembl protein families and is associated with 533 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
MUC6-001ENST0000042167380062439aaENSP00000406861
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS44513Q6W4X9 NM_005961
NP_005952
TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
MUC6-004ENST00000532016656219aaENSP00000433246
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0YDA7 -CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

MUC6-002ENST00000525923553181aaENSP00000433790
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PJC5 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

MUC6-003ENST00000527242404115aaENSP00000436903
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0YEZ6 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays