Description

pyrroline-5-carboxylate reductase 1 [Source:HGNC Symbol;Acc:HGNC:9721]

Synonyms

P5C

Location
INSDC coordinates

chromosome:GRCh38:CM000679.2:81932384:81942412:1

Transcripts

This gene has 16 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
PYCR1-201ENST000006192041904319 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11795A0A024R8U9 J3KQ22 J3KSA9
J3KTA8 J3QKT3 J3QKT4
J3QL24 J3QLK9 J3QRZ0
P32322 Q8TBX0
NM_001282280
NP_001269209
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
PYCR1-002ENST000003379431890316 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11794J3KQ22 J3KSA9 J3KTA8
J3QKT3 J3QKT4 J3QL24
J3QLK9 J3QRZ0 P32322
NM_153824
NP_722546
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PYCR1-001ENST000003298751855319 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11795A0A024R8U9 J3KQ22 J3KSA9
J3KTA8 J3QKT3 J3QKT4
J3QL24 J3QLK9 J3QRZ0
P32322 Q8TBX0
NM_006907
NP_008838
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
PYCR1-005ENST000004031721811288 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS62365E2QRB3 J3KSA9 J3KTA8
J3QKT3 J3QLK9 J3QRZ0
NM_001282279
NP_001269208
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PYCR1-003ENST000004022521346346 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS62366A0A024R8U9 J3KQ22 J3KSA9
J3KTA8 J3QKT3 J3QKT4
J3QL24 J3QLK9 J3QRZ0
P32322 Q8TBX0
NM_001282281
NP_001269210
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PYCR1-015ENST000005777561144217 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-J3KSA9 J3KTA8 J3QKT3
J3QL32 J3QLK9 J3QRZ0
-TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PYCR1-016ENST00000584848949173 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-J3KSA9 J3QL23 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PYCR1-006ENST00000582198868242 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-J3KSA9 J3QKT4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PYCR1-011ENST00000405481841253 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-J3KQ22 J3KSA9 J3KTA8
J3QKT3 J3QL24 J3QLK9
J3QRZ0
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PYCR1-010ENST00000585215767225 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-J3KSA9 J3KTA8 J3QKT3
J3QL24 J3QLK9 J3QRZ0
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PYCR1-007ENST00000579366681109 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-J3KSA9 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PYCR1-013ENST0000058524457884 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-J3KTA8 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PYCR1-012ENST00000579698572165 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-J3KSA9 J3KTA8 J3QKT3
J3QLK9 J3QRZ0
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PYCR1-008ENST00000581271528115 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-J3KTA8 J3QKT3 J3QRZ0
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PYCR1-009ENST00000577624510132 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-J3QR88 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PYCR1-014ENST0000058356437794 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-J3KTA8 J3QKT3 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays