Description

SATB homeobox 1 [Source:HGNC Symbol;Acc:HGNC:10541]

Synonyms

Location
INSDC coordinates

chromosome:GRCh38:CM000665.2:18345387:18445588:1

Transcripts

This gene has 18 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
SATB1-001ENST000003387457810 bp763 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS2631C9J3I0 C9J7F3 C9JGL9
C9JLL5 C9JP21 Q01826
NM_002971
NP_002962
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SATB1-004ENST000004177174589 bp795 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS56242C9J3I0 C9J7F3 C9JGL9
C9JLL5 C9JP21 Q01826
NM_001195470
NP_001182399
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SATB1-002ENST000004549093755 bp763 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS2631C9J3I0 C9J7F3 C9JGL9
C9JLL5 C9JP21 Q01826
NM_001131010
NP_001124482
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SATB1-017ENST000004915191000 bp138 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SATB1-008ENST00000440737975 bp224 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9J3I0 C9J7F3 C9JGL9
C9JLL5 C9JP21
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
SATB1-015ENST00000452260939 bp172 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9IZC5 C9J3I0 C9J7F3
C9JGL9 C9JLL5
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
SATB1-009ENST00000493952626 bp82 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9J3I0 H0YN86 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SATB1-006ENST00000415069594 bp166 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9J3I0 C9J7F3 C9JGL9
C9JLL5
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
SATB1-011ENST00000414509583 bp116 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9J3I0 C9JLL5 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
SATB1-012ENST00000444341579 bp71 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9J3I0 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
SATB1-014ENST00000457005564 bp130 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9J3I0 C9J7F3 C9JLL5
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
SATB1-016ENST00000475083558 bp166 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
SATB1-013ENST00000450898464 bp8 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
SATB1-003ENST000006062964200 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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SATB1-019ENST00000467628551 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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SATB1-010ENST00000487699477 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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SATB1-018ENST00000482788406 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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SATB1-007ENST00000476178361 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Gene-based displays