Description

cardiotrophin-like cytokine factor 1 [Source:HGNC Symbol;Acc:HGNC:17412]

Synonyms

BSF-3, BSF3, CISS2, CLC, NNT-1, NNT1, NR6

Location
INSDC coordinates

chromosome:GRCh38:CM000673.2:67364168:67374177:1

About this gene

This gene has 2 transcripts (splice variants), 57 orthologues, is a member of 1 Ensembl protein family and is associated with 2 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
CLCF1-002ENST000003124381844225aaENSP00000309338
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS31617Q9UBD9 NM_013246
NP_037378
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P3

PRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

CLCF1-001ENST00000533438967215aaENSP00000434122
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS53666Q9UBD9 NM_001166212
NP_001159684
TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2

ALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Gene-based displays