Description

keratin 78 [Source:HGNC Symbol;Acc:HGNC:28926]

Synonyms

K5B

Location
INSDC coordinates

chromosome:GRCh38:CM000674.2:52837804:52849092:1

About this gene

This gene has 5 transcripts (splice variants), 66 orthologues, 1 paralogue, is a member of 3 Ensembl protein families and is associated with 84 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
KRT78-002ENST000003594992554410aaENSP00000352479
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS73473Q8N1N4 NM_001300814
NP_001287743
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
KRT78-001ENST000003046201778520aaENSP00000306261
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8840Q8N1N4 NM_173352
NP_775487
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
KRT78-003ENST0000054711062463aaENSP00000447817
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F8VS93 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

KRT78-005ENST00000547920458103aaENSP00000448562
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0YI54 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

KRT78-004ENST00000551581405No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays