Description

Sp7 transcription factor [Source:HGNC Symbol;Acc:HGNC:17321]

Synonyms

osterix, OSX

Location
INSDC coordinates

chromosome:GRCh38:CM000674.2:53326575:53345315:1

Transcripts

This gene has 4 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
SP7-001ENST000005363243151431 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS44897A0A024RAY8 F8VV67 Q8TDD2
NM_001173467
NP_001166938
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
SP7-002ENST000003038462971431 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS44897A0A024RAY8 F8VV67 Q8TDD2
NM_152860
NP_690599
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
SP7-003ENST000005372101472413 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS73475A0A024RAY8 F8VV67 Q8TDD2
NM_001300837
NP_001287766
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SP7-005ENST000005477551042269 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F8VV67 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays