Description

complexin 1 [Source:HGNC Symbol;Acc:HGNC:2309]

Synonyms

CPX-I

Location
INSDC coordinates

chromosome:GRCh38:CM000666.2:784957:826198:1

About this gene

This gene has 4 transcripts (splice variants), 50 orthologues, 1 paralogue, is a member of 1 Ensembl protein family and is associated with 11 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
CPLX1-001ENST000003040622181134aaENSP00000305613
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS46995O14810 NM_006651
NP_006642
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
CPLX1-003ENST000005052032011113aaENSP00000425960
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6RI11 -TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
CPLX1-004ENST00000504062497110aaENSP00000421947
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6RAG3 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CPLX1-005ENST00000506404569No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays