Description

cholinergic receptor, muscarinic 1 [Source:HGNC Symbol;Acc:HGNC:1950]

Location
INSDC coordinates

chromosome:GRCh38:CM000673.2:62908679:62921807:1

About this gene

This gene has 3 transcripts (splice variants), 43 orthologues, 7 paralogues, is a member of 1 Ensembl protein family and is associated with 50 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
CHRM1-001ENST000003069602964460aaENSP00000306490
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8040P11229 Q53XZ3 NM_000738
NP_000729
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P2

PRINCIPAL2 - APPRIS candidate principal isoform (CCDS).

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

CHRM1-002ENST000005439732123454aaENSP00000441188
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-P11229 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

APPRIS ALT1

ALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

CHRM1-003ENST00000536524549134aaENSP00000444482
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5GZF8 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays