Description

telomeric repeat binding factor 2, interacting protein [Source:HGNC Symbol;Acc:HGNC:19246]

Synonyms

RAP1

Location
INSDC coordinates

chromosome:GRCh38:CM000678.2:75647786:75761872:1

About this gene

This gene has 3 transcripts (splice variants), 61 orthologues, is a member of 3 Ensembl protein families and is associated with 35 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
TERF2IP-001ENST000003000862118399aaENSP00000300086
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS32491Q9NYB0 NM_018975
NP_061848
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

TERF2IP-003ENST000005646711266122aaENSP00000456092
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BR63 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

TERF2IP-002ENST0000056923463999aaENSP00000454399
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H3BMI8 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays