Description

PR domain containing 9 [Source:HGNC Symbol;Acc:HGNC:13994]

Synonyms

MSBP3, PFM6, ZNF899

Location
INSDC coordinates

chromosome:GRCh38:CM000667.2:23507155:23528597:1

About this gene

This gene has 2 transcripts (splice variants), 25 orthologues, 6 paralogues, is a member of 1 Ensembl protein family and is associated with 494 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
PRDM9-001ENST000002966823691894aaENSP00000296682
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS43307Q9NQV7 NM_020227
NP_064612
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
PRDM9-003ENST00000502755558100aaENSP00000425471
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6RD68 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays