Description

NK6 homeobox 1 [Source:HGNC Symbol;Acc:HGNC:7839]

Synonyms

Nkx6.1, NKX6A

Location
INSDC coordinates

chromosome:GRCh38:CM000666.2:84491987:84498450:1

About this gene

This gene has 2 transcripts (splice variants), 69 orthologues, 17 paralogues, is a member of 1 Ensembl protein family and is associated with 49 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
NKX6-1-001ENST000002958862628367aaENSP00000295886
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS3607P78426 NM_006168
NP_006159
TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

NKX6-1-002ENST00000515820219493aaENSP00000449761
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F8VWZ9 -TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

Gene-based displays