Description

CD109 molecule [Source:HGNC Symbol;Acc:HGNC:21685]

Synonyms

CPAMD7, DKFZp762L1111, FLJ38569

Location
INSDC coordinates

chromosome:GRCh38:CM000668.2:73695785:73828316:1

About this gene

This gene has 4 transcripts (splice variants), 69 orthologues, 8 paralogues, is a member of 1 Ensembl protein family and is associated with 1 phenotype.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
CD109-202ENST0000043799494011428aaENSP00000388062
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS55038Q6YHK3 NM_001159587
NP_001153059
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT1APPRIS candidate principal isoform that is conserved in at least three tested non-primate species
Glossary entry for APPRIS
APPRIS website
CD109-201ENST0000042250892211368aaENSP00000404475
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS55039Q6YHK3 NM_001159588
NP_001153060
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
CD109-001ENST0000028709791301445aaENSP00000287097
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS4982Q6YHK3 NM_133493
NP_598000
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI3APPRIS candidate principal isoform (earliest CCDS)
Glossary entry for APPRIS
APPRIS website
CD109-002ENST00000474094341No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays