Description

basic leucine zipper transcription factor, ATF-like [Source:HGNC Symbol;Acc:HGNC:958]

Synonyms

B-ATF, BATF1, SFA-2

Location
INSDC coordinates

chromosome:GRCh38:CM000676.2:75522425:75547015:1

About this gene

This gene has 3 transcripts (splice variants), 59 orthologues, 2 paralogues, is a member of 2 Ensembl protein families and is associated with 23 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
BATF-001ENST00000286639980125aaENSP00000286639
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS9843Q16520 NM_006399
NP_006390
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

BATF-003ENST0000055550436173aaENSP00000450486
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3V266 -TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
BATF-002ENST00000555795617No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays