Description

acyl-CoA synthetase long-chain family member 1 [Source:HGNC Symbol;Acc:HGNC:3569]

Synonyms

ACS1, FACL1, FACL2, LACS, LACS1, LACS2

INSDC coordinates

chromosome:GRCh38:CM000666.2:184755595:184826818:1

Transcripts

This gene has 12 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
ACSL1-201ENST000006229374103527 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS75213B7Z3Z9 NM_001286712
NP_001273641
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ACSL1-011ENST000005150303948698 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS3839B7Z3Z9 P33121 -TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CI1APPRIS candidate principal isoform (longest coding sequence)
Glossary entry for APPRIS
APPRIS website
ACSL1-001ENST000002814553832698 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS3839B7Z3Z9 P33121 NM_001995
NP_001986
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CI1APPRIS candidate principal isoform (longest coding sequence)
Glossary entry for APPRIS
APPRIS website
ACSL1-005ENST000004547033636527 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS75213B7Z3Z9 -TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ACSL1-006ENST000005072952490664 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS68825B7Z3Z9 E7EPM6 NM_001286711
NP_001273640
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ACSL1-007ENST000005133172469698 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS68826P33121 Q108N1 NM_001286710
NP_001273639
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CI1APPRIS candidate principal isoform (longest coding sequence)
Glossary entry for APPRIS
APPRIS website
ACSL1-002ENST000005043422333698 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS3839B7Z3Z9 P33121 NM_001286708
NP_001273637
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CI1APPRIS candidate principal isoform (longest coding sequence)
Glossary entry for APPRIS
APPRIS website
ACSL1-009ENST000005034072409294 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0Y9U7 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

ACSL1-004ENST000005049001583388 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6RER0 -TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ACSL1-008ENST0000050549228094 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q108N2 -CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

ACSL1-003ENST000005067332646126 aa
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D6RG07 -TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

ACSL1-010ENST000005130012796No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays