Description

fetal and adult testis expressed 1 [Source:HGNC Symbol;Acc:HGNC:24683]

Synonyms

CT43, FATE

INSDC coordinates

chromosome:GRCh38:CM000685.2:151716035:151723194:1

About this gene

This gene has 2 transcripts (splice variants), 29 orthologues, is a member of 2 Ensembl protein families and is associated with 49 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
FATE1-001ENST000003703501072183aaENSP00000359375
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS14700Q969F0 NM_033085
NP_149076
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P2

PRINCIPAL2 - APPRIS candidate principal isoform (CCDS).

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

FATE1-003ENST0000041732145080aaENSP00000400493
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H7C1I5 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

APPRIS ALT2

ALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Gene-based displays