Description

cellular retinoic acid binding protein 2 [Source:HGNC Symbol;Acc:HGNC:2339]

Synonyms

CRABP-II

INSDC coordinates

chromosome:GRCh38:CM000663.2:156699606:156705816:1

About this gene

This gene has 4 transcripts (splice variants), 75 orthologues, 12 paralogues, is a member of 1 Ensembl protein family and is associated with 19 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
CRABP2-201ENST000006217841033138aaENSP00000482841
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS1152P29373 NM_001199723
NP_001186652
TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

CRABP2-001ENST00000368222992138aaENSP00000357205
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS1152P29373 NM_001878
NP_001869
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

CRABP2-003ENST00000368221783138aaENSP00000357204
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS1152P29373 -TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

CRABP2-002ENST0000036822045682aaENSP00000357203
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5SYZ4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays