Description

forkhead box P4 [Source:HGNC Symbol;Acc:HGNC:20842]

Synonyms

FLJ40908

Location
INSDC coordinates

chromosome:GRCh38:CM000668.2:41546426:41602384:1

About this gene

This gene has 6 transcripts (splice variants), 62 orthologues, 3 paralogues, is a member of 2 Ensembl protein families and is associated with 75 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
FOXP4-201ENST000003730605948680aaENSP00000362151
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS34447Q8IVH2 NM_001012426
NP_001012426
TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
FOXP4-001ENST000003730635910667aaENSP00000362154
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS4856Q8IVH2 NM_138457
NP_612466
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
FOXP4-002ENST000003079723745680aaENSP00000309823
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS34447Q8IVH2 -TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
FOXP4-003ENST000003730573300678aaENSP00000362148
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS34448Q8IVH2 NM_001012427
NP_001012427
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
FOXP4-006ENST000004092083341668aaENSP00000386958
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B7ZBM3 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

FOXP4-004ENST0000045130536787aaENSP00000393704
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A2A312 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays