Description

chemokine (C-C motif) ligand 21 [Source:HGNC Symbol;Acc:HGNC:10620]

Synonyms

6Ckine, CKb9, ECL, exodus-2, SCYA21, SLC, TCA4

Location
INSDC coordinates

chromosome:GRCh38:CM000671.2:34709005:34710124:1

About this gene

This gene has 2 transcripts (splice variants), 51 orthologues, is a member of 1 Ensembl protein family and is associated with 25 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
CCL21-002ENST00000259607852134aaENSP00000259607
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS6571O00585 Q6ICR7 NM_002989
NP_002980
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P2

PRINCIPAL2 - APPRIS candidate principal isoform (CCDS).

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

CCL21-001ENST00000378792599124aaENSP00000368069
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5VZ73 -TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT1

ALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Gene-based displays