Description

protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]

Synonyms

LIP.1, LIPRIN

Location
INSDC coordinates

chromosome:GRCh38:CM000673.2:70270700:70384403:1

Transcripts

This gene has 24 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
PPFIA1-001ENST000002539255234 bp1202 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS31627B3KVS8 E9PID5 E9PPF6
Q13136
NM_003626
NP_003617
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PPFIA1-002ENST000003895474133 bp1185 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS31628E9PID5 E9PPF6 Q13136
NM_177423
NP_803172
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PPFIA1-018ENST000005287501168 bp390 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
PPFIA1-023ENST00000528853745 bp98 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
PPFIA1-013ENST00000530798710 bp237 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
PPFIA1-008ENST00000530746575 bp158 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PID5 E9PPF6 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
PPFIA1-009ENST00000532024563 bp99 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PID5 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
PPFIA1-003ENST000005325045159 bp583 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-E9PID5 E9PJZ7 E9PPF6
-
PPFIA1-004ENST000005262624537 bp387 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
PPFIA1-017ENST00000530294977 bp55 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
PPFIA1-021ENST00000530390879 bp46 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H0YEK0 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
PPFIA1-016ENST00000526347862 bp61 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
PPFIA1-014ENST00000526369564 bp97 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
PPFIA1-019ENST00000533894553 bp33 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
PPFIA1-025ENST00000525922358 bp48 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
PPFIA1-006ENST000005305483774 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
PPFIA1-012ENST00000532443587 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
PPFIA1-020ENST00000526074573 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
PPFIA1-015ENST00000528284568 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
PPFIA1-010ENST00000530932536 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
PPFIA1-007ENST000005316573036 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
PPFIA1-022ENST00000527612598 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
PPFIA1-024ENST00000532793550 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
PPFIA1-011ENST00000525530514 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---

Gene-based displays