Description

fibroblast growth factor 13 [Source:HGNC Symbol;Acc:HGNC:3670]

Synonyms

FGF2, FHF2

INSDC coordinates

chromosome:GRCh38:CM000685.2:138614731:139222777:1

About this gene

This gene has 8 transcripts (splice variants), 66 orthologues, 13 paralogues, is a member of 2 Ensembl protein families and is associated with 81 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
FGF13-001ENST0000031593019519245aaENSP00000322390
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS14665A8K1P5 Q92913 NM_004114
NP_004105
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
FGF13-201ENST000004418251990226aaENSP00000409276
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS55511Q92913 NM_001139501
NM_001139502
NP_001132973
NP_001132974
TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
FGF13-002ENST000003054141939192aaENSP00000303391
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS14664Q92913 NM_033642
NP_378668
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
FGF13-003ENST000004361981165255aaENSP00000396198
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B1AK17 NM_001139500
NP_001132972
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
FGF13-007ENST000006269091039199aaENSP00000487411
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--NM_001139498
NP_001132970
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
FGF13-005ENST00000455663687207aaENSP00000406916
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B1AJW0 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

FGF13-004ENST0000044867365298aaENSP00000411999
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B1B1H9 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

FGF13-006ENST0000042146035243aaENSP00000388688
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q92913 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays