Description

homeobox D9 [Source:HGNC Symbol;Acc:HGNC:5140]

Synonyms

HOX4, HOX4C

INSDC coordinates

chromosome:GRCh38:CM000664.2:176122720:176124937:1

About this gene

This gene has 2 transcripts (splice variants), 51 orthologues, 16 paralogues, is a member of 1 Ensembl protein family and is associated with 42 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
HOXD9-001ENST000002494991870352aaENSP00000249499
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS2267P28356 NM_014213
NP_055028
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI2APPRIS candidate principal isoform (CCDS)
Glossary entry for APPRIS
APPRIS website
HOXD9-201ENST000006138491131341aaENSP00000484642
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A087X222 -TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website

Gene-based displays