Description

transcription termination factor, RNA polymerase I [Source:HGNC Symbol;Acc:HGNC:12397]

INSDC coordinates

chromosome:GRCh38:CM000671.2:132375548:132406851:1

About this gene

This gene has 3 transcripts (splice variants), 63 orthologues, 1 paralogue, is a member of 1 Ensembl protein family and is associated with 123 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
TTF1-001ENST000003342703052905aaENSP00000333920
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS6948A0A024R8C1 Q15361 NM_007344
NP_031370
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI3APPRIS candidate principal isoform (earliest CCDS)
Glossary entry for APPRIS
APPRIS website
TTF1-201ENST000006125141780390aaENSP00000481441
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS75925A0A087WY09 NM_001205296
NP_001192225
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website
TTF1-002ENST00000461970581No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays