Description

collagen, type X, alpha 1 [Source:HGNC Symbol;Acc:HGNC:2185]

INSDC coordinates

chromosome:GRCh38:CM000668.2:116118923:116158747:1

Transcripts

This gene has 4 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
COL10A1-001ENST000003276733498680 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS5105Q03692 Q5QPC7 Q5QPC8
-TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
COL10A1-201ENST000002432223289680 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS5105Q03692 Q5QPC7 Q5QPC8
NM_000493
NP_000484
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
COL10A1-003ENST00000452729732216 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5QPC7 Q5QPC8 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

COL10A1-002ENST0000041850030351 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5QPC8 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays