Description

homeobox C11 [Source:HGNC Symbol;Acc:HGNC:5123]

Synonyms

HOX3H

Location
INSDC coordinates

chromosome:GRCh38:CM000674.2:53973126:53977643:1

About this gene

This gene has 2 transcripts (splice variants), 45 orthologues, 16 paralogues, is a member of 1 Ensembl protein family and is associated with 2 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
HOXC11-001ENST000005463783261304aaENSP00000446680
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8867O43248 NM_014212
NP_055027
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

HOXC11-002ENST000002430822039378aaENSP00000243082
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-J3KMZ0 -TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

Gene-based displays