Description

ligand dependent nuclear receptor interacting factor 1 [Source:HGNC Symbol;Acc:HGNC:30299]

Synonyms

C1orf103, FLJ11269, RIF1

INSDC coordinates

chromosome:GRCh38:CM000663.2:110947185:110964079:1

About this gene

This gene has 3 transcripts (splice variants), 53 orthologues, is a member of 1 Ensembl protein family and is associated with 100 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
LRIF1-001ENST000003697633475769aaENSP00000358778
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS30800Q5T3J3 NM_018372
NP_060842
TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI3APPRIS candidate principal isoform (earliest CCDS)
Glossary entry for APPRIS
APPRIS website
LRIF1-002ENST000004946751912233aaENSP00000435259
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS41366Q5T3J3 -TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website
LRIF1-003ENST000004852751796233aaENSP00000432290
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS41366Q5T3J3 NM_001006945
NP_001006946
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website

Gene-based displays