Description

teashirt zinc finger homeobox 3 [Source:HGNC Symbol;Acc:HGNC:30700]

Synonyms

KIAA1474, TSH3, ZNF537

Location
INSDC coordinates

chromosome:GRCh38:CM000681.2:31274945:31349547:1

About this gene

This gene has 3 transcripts (splice variants), 71 orthologues, 2 paralogues, is a member of 2 Ensembl protein families and is associated with 341 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
TSHZ3-001ENST0000024058751761081aaENSP00000240587
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS12421Q63HK5 NM_020856
NP_065907
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

TSHZ3-002ENST0000055856944133aaENSP00000475613
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-U3KQ78 -TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TSHZ3-003ENST00000560707835No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays