Description

protocadherin beta 10 [Source:HGNC Symbol;Acc:HGNC:8681]

INSDC coordinates

chromosome:GRCh38:CM000667.2:141187319:141195642:1

About this gene

This gene has 2 transcripts (splice variants), 60 orthologues, 28 paralogues, is a member of 1 Ensembl protein family and is associated with 271 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
PCDHB10-001ENST000002394463290800aaENSP00000239446
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS4252Q9UN67 NM_018930
NP_061753
TSL:NA

Transcript Support Level Not Analysed. Pseudogenes, single exon transcripts, HLA, T-cell receptor and Ig transcripts are not analysed and therefore not given any of the TSL categories.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P2

PRINCIPAL2 - APPRIS candidate principal isoform (CCDS).

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

PCDHB10-201ENST000005158562415804aaENSP00000444518
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A0A0MTM6 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2

ALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Gene-based displays