Description

msh homeobox 2 [Source:HGNC Symbol;Acc:HGNC:7392]

Synonyms

CRS2, FPP, HOX8, MSH, PFM, PFM1

INSDC coordinates

chromosome:GRCh38:CM000667.2:174724533:174730893:1

About this gene

This gene has 2 transcripts (splice variants), 66 orthologues, 16 paralogues, is a member of 1 Ensembl protein family and is associated with 8 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
MSX2-001ENST000002392432241267aaENSP00000239243
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS4392P35548 NM_002449
NP_002440
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
MSX2-002ENST000005077851188134aaENSP00000427425
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6RIS4 -TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

Gene-based displays