Description

NK2 homeobox 3 [Source:HGNC Symbol;Acc:HGNC:7836]

Synonyms

CSX3, NKX2.3, NKX2C, NKX4-3

Location
INSDC coordinates

chromosome:GRCh38:CM000672.2:99532933:99536524:1

About this gene

This gene has 2 transcripts (splice variants), 52 orthologues, 17 paralogues, is a member of 1 Ensembl protein family and is associated with 40 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
NKX2-3-001ENST000003445862097364aaENSP00000342828
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS41558Q8TAU0 NM_145285
NP_660328
TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

NKX2-3-201ENST000006223831986296aaENSP00000479692
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A087WVU3 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

Gene-based displays