Description

RAD23 homolog B (S. cerevisiae) [Source:HGNC Symbol;Acc:HGNC:9813]

Synonyms

HHR23B, HR23B, P58

INSDC coordinates

chromosome:GRCh38:CM000671.2:107283137:107332194:1

About this gene

This gene has 5 transcripts (splice variants), 75 orthologues, 1 paralogue, is a member of 2 Ensembl protein families and is associated with 51 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
RAD23B-001ENST000003580154119409aaENSP00000350708
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS6769P54727 NM_001244713
NM_002874
NP_001231642
NP_002865
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
RAD23B-201ENST000004163733835337aaENSP00000405623
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS59138P54727 NM_001244724
NP_001231653
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
RAD23B-004ENST00000457811811114aaENSP00000396975
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0Y579 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

RAD23B-002ENST00000419616716146aaENSP00000416868
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5W0S5 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

RAD23B-003ENST0000044258745680aaENSP00000415821
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5W0S4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays