Description

cannabinoid receptor 1 (brain) [Source:HGNC Symbol;Acc:HGNC:2159]

Synonyms

CANN6, CB-R, CB1, CB1A, CB1K5, CNR

Location
INSDC coordinates

chromosome:GRCh38:CM000668.2:88139864:88166359:1

About this gene

This gene has 7 transcripts (splice variants), 69 orthologues, 12 paralogues, is a member of 3 Ensembl protein families and is associated with 147 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
CNR1-001ENST000003695016031472aaENSP00000358513
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS5015P21554 S5TLS4 NM_001160226
NM_001160258
NM_001160259
NM_016083
NP_001153698
NP_001153730
NP_001153731
NP_057167
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

CNR1-006ENST000003694995549472aaENSP00000358511
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS5015P21554 S5TLS4 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

CNR1-002ENST000005498902122472aaENSP00000446819
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS5015P21554 S5TLS4 -TSL:NA

Transcript Support Level Not Analysed. Pseudogenes, single exon transcripts, HLA, T-cell receptor and Ig transcripts are not analysed and therefore not given any of the TSL categories.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

CNR1-005ENST000004286001550472aaENSP00000412192
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS5015P21554 S5TLS4 -TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

CNR1-004ENST000004688981320439aaENSP00000420188
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS5016P21554 V5KA96 NM_033181
NP_149421
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
CNR1-003ENST00000362094125236aaENSP00000355418
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F8W908 -TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
CNR1-007ENST0000055141759178aaENSP00000446702
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F8W187 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays