Description

proteoglycan 4 [Source:HGNC Symbol;Acc:HGNC:9364]

Synonyms

bG174L6.2, CACP, FLJ32635, HAPO, JCAP, MSF, SZP

INSDC coordinates

chromosome:GRCh38:CM000663.2:186296279:186314562:1

About this gene

This gene has 5 transcripts (splice variants), 58 orthologues, 2 paralogues, is a member of 1 Ensembl protein family and is associated with 2 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
PRG4-001ENST0000044519250441404aaENSP00000399679
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS1369Q92954 NM_005807
NP_005798
TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI3APPRIS candidate principal isoform (earliest CCDS)
Glossary entry for APPRIS
APPRIS website
PRG4-002ENST0000036748349211363aaENSP00000356453
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS44288Q92954 NM_001127708
NP_001121180
TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PRG4-003ENST0000036748547651311aaENSP00000356455
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS44287Q92954 NM_001127709
NM_001127710
NP_001121181
NP_001121182
TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website
PRG4-004ENST000003674822606854aaENSP00000356452
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-J3KP74 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PRG4-005ENST00000533951531162aaENSP00000431330
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PLR3 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays