Description

caudal type homeobox 1 [Source:HGNC Symbol;Acc:HGNC:1805]

INSDC coordinates

chromosome:GRCh38:CM000667.2:150166795:150184558:1

About this gene

This gene has 2 transcripts (splice variants), 57 orthologues, 2 paralogues, is a member of 1 Ensembl protein family and is associated with 28 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
CDX1-001ENST000002316561758265aaENSP00000231656
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS4304P47902 NM_001804
NP_001795
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
CDX1-201ENST000006161541343154aaENSP00000477928
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A087WTJ6 -TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

Gene-based displays