Description

FIG4 phosphoinositide 5-phosphatase [Source:HGNC Symbol;Acc:HGNC:16873]

Synonyms

ALS11, CMT4J, dJ249I4.1, hSac3, KIAA0274, SAC3

INSDC coordinates

chromosome:GRCh38:CM000668.2:109691312:109825428:1

About this gene

This gene has 5 transcripts (splice variants), 72 orthologues, is a member of 1 Ensembl protein family and is associated with 10 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
FIG4-001ENST000002301243011907aaENSP00000230124
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS5078Q92562 NM_014845
NP_055660
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
FIG4-005ENST00000368941791139aaENSP00000357937
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5TCS4 -TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
FIG4-003ENST0000041995172499aaENSP00000396566
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5JRV4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

FIG4-004ENST00000454215712237aaENSP00000412156
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5TCS5 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

FIG4-002ENST00000415980439136aaENSP00000405660
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0Y6G7 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays