Description

CD5 molecule [Source:HGNC Symbol;Acc:HGNC:1685]

Synonyms

LEU1, T1

Location
INSDC coordinates

chromosome:GRCh38:CM000673.2:61102395:61127852:1

About this gene

This gene has 2 transcripts (splice variants), 48 orthologues, is a member of 1 Ensembl protein family and is associated with 76 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
CD5-001ENST000003477853221495aaENSP00000342681
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8000P06127 NM_014207
NP_055022
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

CD5-002ENST00000544014547165aaENSP00000440899
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5GYK3 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays