Description

sialic acid binding Ig-like lectin 5 [Source:HGNC Symbol;Acc:HGNC:10874]

Synonyms

CD170, CD33L2, OB-BP2, SIGLEC-5

Location
INSDC coordinates

chromosome:GRCh38:CM000681.2:51611503:51645545:1

About this gene

This gene has 2 transcripts (splice variants), 143 orthologues, 11 paralogues, is a member of 1 Ensembl protein family and is associated with 133 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
SIGLEC5-201ENST000005701062384551aaENSP00000455510
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS33088O15389 NM_003830
NP_003821
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

SIGLEC5-001ENST000005342612360551aaENSP00000473238
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS33088O15389 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Gene-based displays