Description

TIMP metallopeptidase inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:11820]

Synonyms

CLGI, EPO, TIMP

Location
INSDC coordinates

chromosome:GRCh38:CM000685.2:47582313:47586789:1

About this gene

This gene has 5 transcripts (splice variants), 45 orthologues, 3 paralogues, is a member of 2 Ensembl protein families and is associated with 12 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
TIMP1-001ENST00000218388892207aaENSP00000218388
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS14281P01033 Q6FGX5 NM_003254
NP_003245
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

TIMP1-002ENST000004567541095136aaENSP00000406671
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5H9B5 -TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TIMP1-003ENST00000377017626143aaENSP00000366216
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5H9A7 -TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TIMP1-005ENST00000445623595165aaENSP00000410983
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0Y789 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

TIMP1-004ENST0000044173834196aaENSP00000405380
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5H9B4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays