Description

jade family PHD finger 3 [Source:HGNC Symbol;Acc:HGNC:22982]

Synonyms

JADE-3, KIAA0215, PHF16

Location
INSDC coordinates

chromosome:GRCh38:CM000685.2:46912276:47061242:1

About this gene

This gene has 4 transcripts (splice variants), 64 orthologues, 8 paralogues and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
JADE3-001ENST000006146284934823aaENSP00000481850
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS14271A0A024R1A2 Q92613 NM_014735
NP_055550
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
JADE3-201ENST000006112504713823aaENSP00000479377
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS14271A0A024R1A2 Q92613 NM_001077445
NP_001070913
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
JADE3-002ENST00000424392636186aaENSP00000391009
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F2Z3N8 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

JADE3-003ENST00000455411492114aaENSP00000400584
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F2Z2B6 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays