Description

neuropilin 1 [Source:HGNC Symbol;Acc:HGNC:8004]

Synonyms

CD304, NRP, VEGF165R

Location
INSDC coordinates

chromosome:GRCh38:CM000672.2:33177492:33336262:1

Transcripts



This gene has 14 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
NRP1-001ENST000002653715882923 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7177NRP1-001 O14786 Q7Z5M2
Q9H2D7 Q9H2D8 Q9H2D9
Q9H2E0
-TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [01-09-2014]
Glossary entry for APPRIS
APPRIS website
NRP1-202ENST000003748675877923 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7177NRP1-202 O14786 Q7Z5M2
Q9H2D7 Q9H2D8 Q9H2D9
Q9H2E0
NM_001244972
NM_001244973
NM_003873
NP_001231901
NP_001231902
NP_003864
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [01-09-2014]
Glossary entry for APPRIS
APPRIS website
NRP1-003ENST000003748222213644 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS31180NRP1-003 O14786 Q7Z5M2
Q9H2D8 Q9H2D9 Q9H2E0
NM_001024628
NP_001019799
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
NRP1-004ENST000003748211988609 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS31179NRP1-004 O14786 Q7Z5M2
Q9H2D9 Q9H2E0
NM_001024629
NP_001019800
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
NRP1-203ENST000003959955826906 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PEP6 NRP1-203 Q5JWQ2
Q7Z5M2 Q9H2D7 Q9H2D8
Q9H2D9 Q9H2E0
-TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
NRP1-002ENST000003748755407735 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-NRP1-002 Q5JWQ6 Q9H2D7
Q9H2D9
-TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
NRP1-006ENST000004323724137597 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-NRP1-006 Q5JWQ4 Q7Z5M2
Q9H2D9 Q9H2E0
-TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
NRP1-005ENST000003748233737704 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-NRP1-005 Q5T7F0 Q7Z5M2
Q9H2D9 Q9H2E0
-TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
NRP1-201ENST000003748162804641 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E7EX60 NRP1-201 Q7Z5M2
Q9H2D9 Q9H2E0
-TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
NRP1-008ENST0000041867557977 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-NRP1-008 Q9H2D8 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

NRP1-010ENST0000046693252360 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-NRP1-010 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

NRP1-011ENST00000455749518170 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-NRP1-011 Q9H2D9 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

NRP1-009ENST00000413802497105 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-NRP1-009 Q5JWQ2 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

NRP1-007ENST00000431894372100 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-NRP1-007 Q9H2D8 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays