Description

secretagogin, EF-hand calcium binding protein [Source:HGNC Symbol;Acc:HGNC:16941]

Synonyms

CALBL, DJ501N12.8, SECRET, SEGN

Location
INSDC coordinates

chromosome:GRCh38:CM000668.2:25652201:25701783:1

About this gene

This gene has 3 transcripts (splice variants), 68 orthologues, 2 paralogues, is a member of 2 Ensembl protein families and is associated with 85 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
SCGN-001ENST000003779611447276aaENSP00000367197
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS4561O76038 NM_006998
NP_008929
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

SCGN-202ENST00000612225140249aaENSP00000484392
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q96P10 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SCGN-201ENST0000033497970449aaENSP00000333933
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q96P10 -TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

Gene-based displays