Description

protein kinase C, zeta [Source:HGNC Symbol;Acc:HGNC:9412]

Synonyms

PKC2

Location
INSDC coordinates

chromosome:GRCh38:CM000663.2:2050470:2185395:1

Transcripts



This gene has 27 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
PRKCZ-001ENST000003785672326592 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS37D6RAN5 D6RAU1 D6RBD4
D6RC84 D6RCN4 D6RD31
D6RDM0 D6REZ8 D6RG01
D6RGG1 F2Z2H9 J3KRP7
PRKCZ-001 Q05513
NM_002744
NP_002735
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

APPRIS PIAPPRIS principal isoform [01-09-2014]
Glossary entry for APPRIS
APPRIS website
PRKCZ-009ENST000004009212294409 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS41229D6RAN5 D6RAU1 D6RBD4
D6RC84 D6RCN4 D6RD31
D6RDM0 D6RG01 D6RGG1
F2Z2H9 J3KRP7 PRKCZ-009
Q05513
NM_001033581
NP_001028753
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PRKCZ-201ENST000004009202009409 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS41229D6RAN5 D6RAU1 D6RBD4
D6RC84 D6RCN4 D6RD31
D6RDM0 D6RG01 D6RGG1
F2Z2H9 J3KRP7 PRKCZ-201
Q05513
NM_001033582
NP_001028754
TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PRKCZ-015ENST000004611061916488 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS55563D6RAN5 D6RAU1 D6RBD4
D6RC84 D6RCN4 D6RD31
D6RDM0 D6RG01 D6RGG1
F2Z2H9 J3KRP7 PRKCZ-015
Q05513
NM_001242874
NP_001229803
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PRKCZ-022ENST00000486681966136 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6RAU1 F2Z2H9 PRKCZ-022
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PRKCZ-017ENST0000047059678898 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6RAN5 D6RBD4 D6RC84
D6RCN4 D6RD31 D6RDM0
D6RG01 J3KRP7 PRKCZ-017
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PRKCZ-011ENST00000497183763105 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F2Z2H9 PRKCZ-011 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PRKCZ-004ENST0000047101871646 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6RC84 D6RCN4 D6RD31
PRKCZ-004
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PRKCZ-010ENST00000470986706109 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6RAN5 D6RBD4 D6RC84
D6RCN4 D6RD31 D6RDM0
D6RG01 D6RGG1 F2Z2H9
J3KRP7 PRKCZ-010
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PRKCZ-020ENST0000049534769821 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6RD31 PRKCZ-020 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PRKCZ-007ENST00000468310690181 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6RCN4 D6RD31 F2Z3C5
PRKCZ-007
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PRKCZ-003ENST0000048268661473 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6RAN5 D6RC84 D6RCN4
D6RD31 D6RDM0 J3KRP7
PRKCZ-003
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PRKCZ-021ENST0000047051156782 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6RAN5 D6RC84 D6RCN4
D6RD31 D6RDM0 D6RG01
J3KRP7 PRKCZ-021
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PRKCZ-006ENST0000046635256425 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6RCN4 D6RD31 PRKCZ-006
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PRKCZ-018ENST0000049632556371 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6RAN5 D6RC84 D6RCN4
D6RD31 J3KRP7 PRKCZ-018
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PRKCZ-016ENST0000046146548061 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6RC84 D6RCN4 D6RD31
J3KRP7 PRKCZ-016
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PRKCZ-026ENST0000050329746865 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6REZ8 PRKCZ-026 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PRKCZ-012ENST000004787701542347 aa
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D6RAU1 E9PBE1 F2Z2H9
PRKCZ-012
-TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PRKCZ-019ENST0000048114071373 aa
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D6RJG4 PRKCZ-019 -TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PRKCZ-002ENST000004792631747No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
-PRKCZ-002 -TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PRKCZ-023ENST00000472017602No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
-PRKCZ-023 -TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PRKCZ-008ENST00000479566501No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
-PRKCZ-008 -TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PRKCZ-014ENST00000466651425No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
-PRKCZ-014 -TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PRKCZ-027ENST00000419838347No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
-PRKCZ-027 -TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PRKCZ-025ENST000005053221859No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
-PRKCZ-025 -TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PRKCZ-024ENST000005036721213No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
-PRKCZ-024 -TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PRKCZ-013ENST00000484419519No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
-PRKCZ-013 -TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays