Description

collagen, type XVII, alpha 1 [Source:HGNC Symbol;Acc:HGNC:2194]

Synonyms

BP180, BPAG2

INSDC coordinates

chromosome:GRCh38:CM000672.2:104031286:104086002:1

Transcripts

This gene has 7 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
COL17A1-001ENST000003534795734 bp1497 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7554Q9UMD9 NM_000494
NP_000485
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
COL17A1-003ENST000003697335488 bp1415 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q9UMD9 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
COL17A1-007ENST000003932111610 bp417 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A2A2Y8 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
COL17A1-002ENST00000433822537 bp66 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
COL17A1-006ENST00000480127420 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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COL17A1-005ENST00000488320626 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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COL17A1-004ENST00000483876622 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Gene-based displays