Description

netrin 1 [Source:HGNC Symbol;Acc:HGNC:8029]

Synonyms

NTN1L

Location
INSDC coordinates

chromosome:GRCh38:CM000679.2:9021542:9244000:1

About this gene

This gene has 2 transcripts (splice variants), 70 orthologues, 6 paralogues, is a member of 1 Ensembl protein family and is associated with 55 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
NTN1-001ENST000001732295954604aaENSP00000173229
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11148O95631 NM_004822
NP_004813
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

NTN1-002ENST00000436734700153aaENSP00000389375
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H7BZF4 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays