Description

vesicle-associated membrane protein 3 [Source:HGNC Symbol;Acc:HGNC:12644]

Synonyms

CEB

Location
INSDC coordinates

chromosome:GRCh38:CM000663.2:7771269:7781432:1

About this gene

This gene has 3 transcripts (splice variants), 72 orthologues, 5 paralogues, is a member of 2 Ensembl protein families and is associated with 19 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
VAMP3-001ENST000000546662205100aaENSP00000054666
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS88Q15836 Q6FGG2 NM_004781
NP_004772
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

VAMP3-002ENST0000047035795472aaENSP00000465820
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-K7EKX0 -TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
VAMP3-003ENST00000487194274No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:4

Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays